Vanilla Bean Crème Brûlée Cheesecake

Category: Desserts That Transform Moments

Vanilla Bean Crème Brûlée Cheesecake Cupcakes combine the silky texture of mini cheesecakes with classic brûlée finishing. Each cupcake features a graham cracker base, creamy vanilla bean filling, and a crisp caramelized sugar top. The cupcakes are baked, chilled, then finished with a quick torch or broil to create the signature brûlée crust. Ideal for special occasions, this fusion highlights familiar flavors in a bite-sized, elegant form. Prep and baking are simple, while the presentation is sure to impress.

Sarah Crisp
Recipe By Sarah Crisp Sarah Crisp
Last updated on Wed, 19 Nov 2025 18:29:13 GMT
A cupcake with a bite taken out of it. Pin
A cupcake with a bite taken out of it. | cookrisp.com

These Vanilla Bean Crème Brûlée Cheesecake Cupcakes bring together the creamy richness of classic cheesecake and the irresistible crackle of caramelized sugar, creating the ultimate mini dessert for any occasion. With real vanilla bean infusing the cheesecake filling and the distinct crème brûlée sugar crust on top, these bakery worthy treats are ready in under an hour of baking time plus a quick prep. Whether you want an elegant last minute dessert or a showstopper for weeknight celebrations, you will love the ease and indulgence these cupcakes deliver.

I first made these Vanilla Bean Crème Brûlée Cheesecake Cupcakes for a friend's birthday when we wanted something both elegant and easy. Over time, they became our go to quick dessert option because everyone in the family asked for that creamy filling and dramatic crackly caramel topping. Letting the kids help with the torching (always supervised) turned each batch into a memorable and fun dessert tradition, making these cupcakes the most requested treat at parties and cozy nights alike.

Gather Your Ingredients

  • Graham cracker crumbs with classic cheesecake crust texture: They create a sturdy, crunchy base and bring familiar cheesecake flavor; you can swap with chocolate wafer crumbs for a richer taste, ensuring the same great texture
  • Granulated sugar for sweetness and that perfect brûlée crust: Used in the crust, filling, and topping; opt for fine granules for easy caramelization, and use as the final layer for a crisp, glassy finish
  • Unsalted butter, melted, to bind the crust: Ensures richness and flavor; always use fresh butter for the most aromatic base and easy mixing
  • Cream cheese, brick style and room temperature: Delivers velvety cheesecake texture; be sure to soften thoroughly for excellent blending and minimal lumps
  • Large eggs to give structure and creaminess: Add one at a time for even mixing and smooth filling; room temperature eggs help keep the texture light
  • Real vanilla bean for bakery level aroma and taste: Scrape fresh vanilla bean seeds for true flavor depth; substitute with two teaspoons pure vanilla extract if needed for convenience
  • All purpose flour to stabilize the filling: Adds substance to the creamy mix and helps cupcakes set perfectly without density
  • Extra granulated sugar for the brûlée top: Use just before serving for a golden, aromatic, shattering shell on each cupcake
  • Gluten free cookie crumbs for an allergy friendly crust option: Ensure to use certified gluten free versions if needed for dietary safety
  • Sour cream as a tangier swap for part of the cream cheese: Substitute for up to a quarter of the total amount for a brighter, slightly tart profile

How to Make Vanilla Bean Crème Brûlée Cheesecake Cupcakes

Prep the Crust for Ultimate Crunch:
Preheat your oven to 325 degrees Fahrenheit and line a twelve cup muffin tin with sturdy cupcake liners. Stir together one cup graham cracker crumbs with two tablespoons granulated sugar and four tablespoons melted unsalted butter until you have a damp sand texture that holds shape when pinched. Scoop about one to two tablespoons of mixture per liner and firmly press in, using a small glass or your fingers to make an even, tight base. This ensures the crust bakes crisp and does not become soggy under the creamy filling.
Whip the Cream Cheese Filling:
In a large bowl, beat sixteen ounces softened cream cheese with half a cup granulated sugar until luxuriously smooth and creamy. Scrape the sides often for a consistent mixture without lumps. Add two large eggs, one at a time, beating just enough to incorporate each before the next. Split a vanilla bean lengthwise, scrape out all the fragrant seeds, and stir them into the batter along with two tablespoons of all purpose flour. Mix until light, flecked with vanilla, and just combined to avoid overwhipping that can cause sinking.
Divide and Bake to Creamy Perfection:
Portion the cream cheese filling evenly among cupcake liners, filling each about three quarters full. Gently tap the muffin tin on the counter to release any trapped bubbles for a uniform bake. Bake in the center rack for eighteen to twenty minutes, watching for edges to set and centers to remain just a little wobbly when jostled. Remove promptly to prevent overbaked, dry cheesecake—look for pale tops and a subtle sheen at the center.
Cool Completely for the Smoothest Texture:
Let cupcakes cool in the pan fifteen minutes, then transfer to a wire rack until completely cool for best texture. Once at room temperature, refrigerate at least two hours or overnight to allow flavors to meld and the filling to firm to the traditional cheesecake creaminess.
Brûlée the Sugar Topping for Showstopper Crunch:
Just before serving, sprinkle one teaspoon granulated sugar in a thin, even layer over each chilled cupcake. Use a small kitchen torch in slow, circular motions to melt and caramelize the sugar until bubbling and deeply golden. Let the crispy top set for two minutes before serving for best crackle. Alternatively, broil in the oven for one to two minutes on the top rack, watching closely to avoid burning. Always allow tops to cool slightly for that perfect signature brûlée snap.
A close up of a vanilla bean crème brûlée cheesecake cupcake.
A close up of a vanilla bean crème brûlée cheesecake cupcake. | cookrisp.com

One ingredient I always splurge on is fresh vanilla beans because the difference in fragrance and flavor is immediately clear and makes friends ask for the recipe every time. Baking these together as a family on rainy weekends, with everyone taking turns torching the sugar (safely), has become a cherished dessert tradition. Seeing the sugar bubble and crackle is a highlight for kids and adults alike.

Smart Swaps and Variations

These Vanilla Bean Crème Brûlée Cheesecake Cupcakes adapt easily for different dietary needs or what you have in your pantry. For gluten free versions, swap graham cracker crumbs for certified gluten free cookies or almond flour. For dairy free, use plant based cream cheese and vegan butter, and swap coconut cream for any added sour cream. Boost the flavor profile by choosing a chocolate crust, swirling in lemon or raspberry curd before baking, or topping with crushed pistachios after the brûlée sets. Adjust sweeteners to stevia or monk fruit for low carb diets and add seasonal fruits for a fresh touch year round.

How to Store and Reheat Vanilla Bean Crème Brûlée Cheesecake Cupcakes

To keep your Vanilla Bean Crème Brûlée Cheesecake Cupcakes creamy and crisp, always cool fully before storing. Arrange in a single layer in an airtight container lined with parchment and chill for up to five days. Add the brûlée sugar topping just before serving for best crunch. For freezing, wrap each cooled cupcake tightly in plastic, place in a freezer container, and freeze up to three months. Thaw overnight in the fridge, then caramelize the sugar topping before serving for a fresh, bakery style finish. Bring to room temperature for fifteen minutes before eating for the most luscious texture.

What to Serve with Vanilla Bean Crème Brûlée Cheesecake Cupcakes

These elegant cheesecake cupcakes pair perfectly with an espresso or cappuccino to balance their sweetness and highlight the vanilla flavor. Serve at events alongside fresh strawberry or raspberry sauce, a dollop of homemade whipped cream, or on a dessert platter with chocolate dipped strawberries. Their individual size makes them ideal for brunches, baby showers, or as a sophisticated ending to holiday dinners, and they easily coordinate with sparkling wines or herbal teas for a memorable dessert spread.

Nutritional Benefits

Vanilla Bean Crème Brûlée Cheesecake Cupcakes provide satisfying protein from eggs and dairy while keeping portion size moderate. Each cupcake is lower in overall calories than a full cheesecake slice and avoids artificial flavors when you use real vanilla bean or pure extract. Calcium and B vitamins from cream cheese and eggs support nutrition, and customizable swaps can make these treats gluten free, nut free, or dairy free as needed, so everyone can enjoy a delectable dessert without compromise.

Recipe Success Tips

Getting the perfect creamy middle and crispy sugar shell in these Vanilla Bean Crème Brûlée Cheesecake Cupcakes can be easy with a few key tips. Avoid cracks by not overbaking and always letting cupcakes cool in the pan before transferring and chilling thoroughly. Do not brûlée until ready to serve or the sugar will soften. For silky smooth filling, do not overmix the eggs, and always use brick style cream cheese at room temperature. A kitchen torch gives best color and crunch, but the broiler is a close backup when needed.

A slice of vanilla bean crème brûlée cheesecake cupcake.
A slice of vanilla bean crème brûlée cheesecake cupcake. | cookrisp.com

These Vanilla Bean Crème Brûlée Cheesecake Cupcakes are a showstopping dessert you can make at home without stress or special equipment. Try baking a batch soon and share the fun by adding your own creative toppings or a seasonal twist for friends and family to enjoy.

Common Questions About This Recipe

→ Can I use vanilla extract instead of a vanilla bean?

Yes, you can substitute 2 teaspoons of high-quality vanilla extract if you don't have a vanilla bean. The flavor remains rich and aromatic.

→ What if I don't have a kitchen torch for the brûlée topping?

If you don't own a kitchen torch, simply place the sugared cupcakes under a broiler for 1-2 minutes. Watch closely to avoid burning the sugar.

→ How long should the cupcakes chill before serving?

Allow the cupcakes to chill for at least 2 hours, but overnight is best for optimal texture and flavor development.

→ Can these be frozen for later?

You can freeze the cupcakes (without the brûlée topping) in an airtight container. Add the sugar topping and caramelize just before serving for best results.

→ Are there alternative crust options?

Chocolate cookie crumbs make an excellent alternative to the classic graham cracker base, providing a deeper flavor profile.

Vanilla Bean Crème Brûlée Cheesecake

Delicate vanilla bean cheesecake cupcakes with a crisp brûlée sugar crust. Perfect for spring gatherings, dessert tables, or unique celebrations. An elevated twist on classic favorites, these bite-sized treats are one to keep handy.

Prep Time
20 minutes
Time to Cook
20 minutes
Complete Time
40 minutes
Recipe By Sarah Crisp: Sarah Crisp

Recipe Type: Sweet Comfort

Level of Difficulty: Moderate Difficulty

Cuisine Style: American

Makes: 12 Number of Servings (12 cheesecake cupcakes)

Dietary Categories: Suitable for Vegetarians

Ingredients You’ll Need

→ Crust

01 1 cup graham cracker crumbs
02 2 tablespoons granulated sugar
03 4 tablespoons unsalted butter, melted

→ Cheesecake Filling

04 16 ounces cream cheese, softened
05 1/2 cup granulated sugar
06 2 large eggs
07 1 vanilla bean, split and seeds scraped or 2 teaspoons vanilla extract
08 2 tablespoons all-purpose flour

→ Crème Brûlée Topping

09 1/4 cup granulated sugar

How to Make It

Step 01

Preheat oven to 325°F. Line a standard 12-cup muffin tin with paper liners.

Step 02

Combine graham cracker crumbs, granulated sugar, and melted butter in a bowl. Stir until evenly moistened, then press about 1 to 2 tablespoons into the base of each cupcake liner, compacting with the back of a spoon.

Step 03

Blend softened cream cheese and sugar together until mixture is smooth and creamy. Add eggs one at a time, mixing thoroughly after each addition. Incorporate vanilla bean seeds or extract and flour, beating until just combined.

Step 04

Divide cheesecake batter evenly among lined muffin cups, filling each about three-quarters full. Bake for 18 to 20 minutes, or until centers are just set.

Step 05

Allow cheesecakes to cool completely at room temperature, then refrigerate for at least 2 hours or overnight for optimal texture.

Step 06

Sprinkle an even layer of granulated sugar over each chilled cheesecake. Use a kitchen torch to melt and caramelize sugar until golden and crisp. Alternatively, broil for 1–2 minutes, monitoring closely to avoid burning.

Step 07

Serve chilled, topped with a crisp caramelized sugar crust.

Extra Suggestions

  1. Chilling the cheesecakes overnight deepens flavor and improves texture for a creamier result.
  2. Substitute chocolate wafer cookies for the crust base to add rich cocoa notes.
  3. Garnish with fresh raspberries or a drizzle of caramel for enhanced presentation.

Things You'll Need

  • 12-cup muffin tin
  • Cupcake liners
  • Electric mixer
  • Kitchen torch or broiler

Allergen Information

Always read labels for allergens and consult your doctor if unsure.
  • Contains milk, eggs, and wheat.

Nutritional Breakdown (Per Serving)

This is for general info and isn't a replacement for professional advice.
  • Calories: 430
  • Fat Content: 18 grams
  • Carbohydrates: 40 grams
  • Protein Content: 15 grams